Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812394.1_cds_XP_016497119.1_11273
CDS Infomation

[gene=LOC107815984] [db_xref=GeneID:107815984] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X3] [protein_id=XP_016497119.1] [location=complement(join(37676..37684,37798..37878,39016..39120,39314..39478,39571..40152,40656..41081,41252..41348,41424..41485,41626..41713,41844..41905,44771..44866))] [gbkey=CDS]
Sequence

ATGGCAAATCGAAAGGAGGATGAGAAGAATGAAAGGATTATACGGAATCTGCTTAAGCTT
CCTGATAATCGACGGTGTATGAACTGTAATAGTTTGGGCCCGCAATATGTTTGCACTAAT
TTCTGGACATTTGTTTGCACAACATGCAGCGGTATACATCGGGAGTTCACCCATAGAGTG
AAGTCAGTATCCATGGCTAAATTTACCTCACAAGAAGTTAGTGCCCTCCAAGGAGGAGGA
AATGCGAGTGCAAAGGTAATATATTTGAAGGACTGGGACACACAGCGTAATTCTCTCCCA
GACGGCAGTAATGTAGAGAGGCTTCGTGATTTTATTAAGCATGTCTATGTGGATAGAAGA
TACACTGGTGAAAGGAGCCTTGAGAAGCCACCAAGGGGAAAAATGGCTGAAGCTGAGAAC
TTAAGCGAAAACAGGAAGACAGATACCTACCAAGGTGGGTCTCGAAGCCCACCAAATGAG
GAAGTATATGAGCGACGATACAGCAACAGGCCTAGTCCTGGTGGGAGTAGTGGTGGGAGA
AGTCCTGGATATGATCAAAGAAGTCCTGCACGTGCTGAAGTAATCAATGACTGGCGACGA
GAGGATAGATTCGGGAATGGAAGGAGATCTGATGATGGTAGAATTTCGGATGGAGGATCC
AAGTTTGAAAGCATGTCACCTGATCGTCAAAGCGACCTTGACTCATCCAGTCCCCCAATG
GTTCGACCTGTTAGAGAGATTCTTGGAGATAGTGTATCTCCCCTTCGAGTTATTGAACCT
CCGAAAACTAATGGTGGTAGGTCTGCTGCTGGTGGCTCCATGCTAACCCAGAGGACTGCA
TCTTCCAGTAGCTTGACGTCCTCCAATGGGAACCCTGTTGAACTTAAGACAGAAACCTCA
TTAATCAATTTTGATGATGTTCCTGAACCTGCAGCTTCTGTACCGGCCCCACAAATACAA
CAATCTGCTACAGTCATGCCTGTTGCACAACCGACAAAATCTGCTTCTGACAACTGGGCG
AATTTTGATTCAATAGCAGAGGTGAAAGCATCTCCAGCTCCTTCAAACACCAATCTACTG
GAATCTATATTCTCAGAGTTGGCTGCTCCAGCAACTGTAACTGGTCACTCTGCAGCACCT
CCAGGTGGTAGTGCACCTCCGGTCACTCCCTTCAGTAGTTTTGTTCCTGGAGCTGCAATT
GTGGAAAACTCAGTAGCATTTCCATTTGGTGGTGCTTCAGCTGCACCCATTGGACCGACA
TCACTACTGTCGGTTAGTGGTACCTTTGCAAATAACCCCAGAGGACAATGGTCTAATATG
CTACCTCAGCAGAGTTCCTTGTTTCCTATGACTGGCCCACAGCCCATATCGCAGCTTTCT
ACTCCAGCTGCTGGTGGACCTTCTGGAAATCAGCAGTGGAATCCTTCAGTTACCGCAACT
ACACCTGGGTTTCCTAGTAGGGGAACTGCACAAGTGTCTCAAGCTGTAAACCCTGCCCTT
CTGGGAGCCACTTCTGCAGTTGCATCTCAAGCTGCTCCTGTTGAAATCAAATCTAGCGGA
AGAAAACAACTGCCTGAGGATTTGTTTGCTGTAAATTATTCTTCAATTCCTGGCGCTTTT
CCAGGCTGGCATACTGGTCCACAGCATGGCTATGGATTCGCAATGCAATACAACATGTCT
ATGGCTACAAATGCTTTGCCACAGCCATCAAAATCAGCAAATCCTTTTGATGTCATAAAC
GAGCCATCTTCACAAGCCTCAACGGTTGATTGA

Peptide Sequence

PEP ID

XP_016497119.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X3 [Nicotiana tabacum]
Sequence

MANRKEDEKNERIIRNLLKLPDNRRCMNCNSLGPQYVCTNFWTFVCTTCSGIHREFTHRV
KSVSMAKFTSQEVSALQGGGNASAKVIYLKDWDTQRNSLPDGSNVERLRDFIKHVYVDRR
YTGERSLEKPPRGKMAEAENLSENRKTDTYQGGSRSPPNEEVYERRYSNRPSPGGSSGGR
SPGYDQRSPARAEVINDWRREDRFGNGRRSDDGRISDGGSKFESMSPDRQSDLDSSSPPM
VRPVREILGDSVSPLRVIEPPKTNGGRSAAGGSMLTQRTASSSSLTSSNGNPVELKTETS
LINFDDVPEPAASVPAPQIQQSATVMPVAQPTKSASDNWANFDSIAEVKASPAPSNTNLL
ESIFSELAAPATVTGHSAAPPGGSAPPVTPFSSFVPGAAIVENSVAFPFGGASAAPIGPT
SLLSVSGTFANNPRGQWSNMLPQQSSLFPMTGPQPISQLSTPAAGGPSGNQQWNPSVTAT
TPGFPSRGTAQVSQAVNPALLGATSAVASQAAPVEIKSSGRKQLPEDLFAVNYSSIPGAF
PGWHTGPQHGYGFAMQYNMSMATNALPQPSKSANPFDVINEPSSQASTVD

Transcript Sequence

Gene sequence data has not been registered.